Identification of gene mutations that cause Marfan syndrome, aneurysm and related disorders can aid diagnosis and may dramatically improve outcome. Comprehensive testing is indicated in patients who are clinically suspected to have any of the above.
Identification of gene mutations that cause Marfan syndrome, aneurysm and related disorders can aid diagnosis and may dramatically improve outcome. Comprehensive testing is indicated in patients who are clinically suspected to have any of the above.
The Ambry test: Marfan, Aneurysm and Related Disorders Next-Gen Sequencing Panel detects mutations in all coding domains and splice junctions of ACTA2, CBS, FBN1, FBN2, MYH11, COL3A1, SLC2A10, SMAD3, TGFBR1 and TGFBR2 genes. This Ambry test identifies >96% of described mutations in these genes (analytic sensitivity).
Marfan syndrome is an autosomal dominant, multisystem disorder characterized by cardiovascular, skeletal, and ocular abnormalities. One of the major features of Marfan syndrome (MFS) and the majority of Marfan-related disorders is an increased risk for Thoracic Aortic Aneurysms (TAAs), which if left untreated, has a high morbidity and mortality rate. Identifying individuals at risk for TAAs is complicated by the fact that sudden cardiac death is often the major first clinical signs.
Diagnosis of MFS or Marfan-like syndromes is also often challenged by the extensive phenotypic variability within and between families, phenotypic overlap with clinically related disorders, and age-dependent symptoms that appear over time. Marfan syndrome is the most common inherited form of syndromic TAAs, aneurysms that occur with a wide range of clinical abnormalities across various body systems. Other syndromic TAA conditions include Marfan-like Syndrome, Loeys-Dietz Syndrome, Ehlers-Danlos Syndrome (EDS), and Arterial tortuosity syndrome. Familial nonsyndromic TAAs are characterized by aneurysms without the presence of other clinical manifestations and typically follow an autosomal dominant pattern of inheritance. Three genes have been associated with familial nonsyndromic TAAs: TGFBR2 in TAA2, ACTA2 in TAA4, MYH11 in familial TAA and patent ductus arteriosus.
Sporadic forms of TAAs have also been reported. To date, ten genes (ACTA2, CBS, FBN1, FBN2, MYH11, COL3A1, SLC2A10, SMAD3, TGFBR1, and TGFBR2) have been associated with various forms of MFS and Marfan-related syndromes. Establishing the cause of Marfan and Marfan-like syndromes is essential for prognosis, management, and genetic counseling.
Identification of a Marfan syndrome, aneurysms and related disorders gene mutations can aid diagnosis and may dramatically improve outcome. Comprehensive testing is indicated in patients who are clinically suspected to have any of the above. The Marfan, Aneurysm and Related Disorders Next-Gen Sequencing Panel may also be considered for differential diagnosis, carrier testing for individuals with a family history, and for at risk pregnancies.
The Marfan, Aneurysm and Related Disorders Next-Gen Sequencing Panel is a comprehensive gene sequencing test for 10 genes (ACTA2, CBS, FBN1, FBN2, MYH11, COL3A1, SLC2A10, SMAD3, TGFBR1, and TGFBR2) associated with Marfan Syndrome (MFS) and Marfan Syndrome related disorders. Genomic deoxyribonucleic acid (gDNA) is isolated from the patient’s specimen using a standardized kit and quantified by agarose gel electrophoresis.
Sequence enrichment is carried out by incorporating the gDNA into microdroplets along with primer pairs designed to the target MFS gene coding exons followed by polymerase chain reaction (PCR) and Next-Gen sequencing. Additional Sanger sequencing is performed for any regions missing coverage, and for any regions with sequence similarity elsewhere in the genome. Suspect variant calls other than polymorphisms are verified by Sanger sequencing in sense and antisense directions. The Marfan, Aneurysm and Related Disorders Next-Gen Sequencing Panel targets detection of mutations in 10 genes by either Next-Gen or Sanger sequencing of all coding domains plus at least 20 bases into the 5’ and 3’ ends of all the introns.
The following sites are used to search for previously described Marfan Syndrome and Marfan Syndrome related disorders mutations and polymorphisms: Human Gene Mutation Database (HGMD) and online search engines (e.g., OMIM, PubMed).
This Ambry test identifies >96% of described mutations in ACTA2, CBS, FBN1, FBN2, MYH11, COL3A1, SLC2A10, SMAD3, TGFBR1 and TGFBR2 (analytic sensitivity).
Blood: Collect 6-10cc blood in purple top EDTA tube (preferred) or yellow top citric acetate tube.
Storage: 2-8°C. Do not freeze.
Shipment: Room temperature for two-day delivery.
For transfusion patients: Wait at least two weeks after a packed cell or platelet transfusion and at least four weeks after a whole blood transfusion prior to blood draw
DNA: Collect 20μg of of DNA in TE (10mM Tris-Cl pH 8.0, 1mM EDTA); preferred at 200 ng/μl.
Quality: Please provide DNA OD 260:280 ratio (preferred 1.7-1.9) and send agarose picture with high molecular weight genomic DNA, if available.
Storage: -20°C.
Shipment: Shipment frozen on dry ice is preferred, or ship on ice.
Saliva: Collect 2ml in Oragene Self Collection container
Storage: At room temperature in sterile bag.
Shipment: Ship room temperature for two-day deliver
| Test Code | Technique |
|---|---|
| 8780 | Marfan Syndrome NextGen Sequencing Panel (concurrent) ACTA2, CBS, FBN1, FBN2, MYH11, COL3A1, SLC2A10, SMAD3, TGFBR1, TGFBR2 gene sequence analyses |
| 8782 | Marfan Syndrome NextGen Sequencing Panel Steps 1 and 2 Step 1: FBN1 gene sequence analysis Step 2: ACTA2, CBS, FBN2, MYH11, COL3A1, SLC2A10, SMAD3, TGFBR1, TGFBR2 gene sequence analyses |
| 5660 | FBN1 gene sequence analysis |
| 8788 | FBN1, TGFBR1 and TGFBR2 gene sequence analyses |
| Technique | WEEKS |
|---|---|
| Marfan, Aneurysm and Related Disorders Next-Gen Sequencing Panel | 6-10 |
| FBN1 gene sequence analysis only | 6-8 |
| FBN1, TGFBR1, TGFBR2 gene sequence analyses | 6-8 |
| Marfan Reflex Step 1 FBN1 Step 2 Rest of panel |
6-12 6-12 6-12 |